Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., catecholate siderophore receptor CirA from Escherichia coli ECRC100

 Score =  371 bits (952), Expect = e-107
 Identities = 254/689 (36%), Positives = 359/689 (52%), Gaps = 67/689 (9%)

Query: 1   MSRFNPSPVSLSVTLGLMFSASAFAQDATKTD---ETMVVTAAGYAQVIQNAPASISVIS 57
           M R NP      V +GL  SA + A      D   ETMVVTA+   Q +++APASISVI+
Sbjct: 1   MFRLNPF-----VRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVIT 55

Query: 58  REDLESRYYRDVTDALKSVPGVTVTGGGDTTD-ISIRGMGSNYTLILVDGKRQTSRQT-- 114
           +EDL+ +  +++ D LK VPGV +T  GD    +SIRG+ S+YTLILVDGKR  SR    
Sbjct: 56  QEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVF 115

Query: 115 RPNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQL 174
           R N      +  W+P + +IERIEV+RGPMS+LYGSDA+GGV+NIIT+K  Q+WSG V +
Sbjct: 116 RHND----FDLNWIP-VDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTV 170

Query: 175 STVVQENRASGDEQSANFFVTGPLSD-ALSLQVYGQTTQRDEDEIEHGYGDK-------- 225
            T +QE+R  GD  +  FF +GPL D  L ++ YG   +R++D+ ++             
Sbjct: 171 DTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIE 230

Query: 226 --SLRSLTSKLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNH 283
             S R    +  +  N +H      G   QDR+++              S   N+  R +
Sbjct: 231 GFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSD--------------SLDKNRLERQN 276

Query: 284 VAVSHQGDWQDVGQSDT--YLQYEENTNKSREMSI---DNTV-FKSTLVAPIGEHMLSFG 337
            +VSH G W D G S+   Y +  EN N      I    NTV  K TL        L+ G
Sbjct: 277 YSVSHNGRW-DYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAINQFLTVG 335

Query: 338 VEGKHESLEDKTSNKISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKNYGSHFS 397
            E +H+ L D  +    + +  S +Q+A F+EDEW + E   LT G R+D  + YG H+S
Sbjct: 336 GEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWS 395

Query: 398 PRVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDWGQVS--GGGNIYGNPDLKPETSINK 455
           PR Y V+N     TVKGG +T F+AP L +++PDW   S  G   I G+PDLKPETS + 
Sbjct: 396 PRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESW 455

Query: 456 ELSLMYSTG----SGLAASLTAFHNDFKDKITRV------ACPANICTAGPNQWGAAPTY 505
           EL L Y        G+ +S+T F ND KD+I+        A P      G    G     
Sbjct: 456 ELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFTANGVPVFS 515

Query: 506 RVNIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLS 565
             N+++A   G E  L +P  +  +LS +YTY      S N   +PL  LP H  N  L 
Sbjct: 516 YYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDVS-NGENKPLSDLPFHTANGTLD 574

Query: 566 WQTTDR--LNSWANLNYRGKEMQPEGGASNDDFIAPSYTFIDTGVTYALTDTATIKAAVY 623
           W+   R   + + + +Y G++      A         YT  +TG  + +T    ++A V 
Sbjct: 575 WKPLAREDWSFYVSGHYTGQKRADSATAKTPG----GYTIWNTGAAWQVTKDVKLRAGVL 630

Query: 624 NLFDQEVNYAEYGYVEDGRRYWLGLDIAF 652
           NL D++++  +Y Y EDGRRY++ +D  F
Sbjct: 631 NLGDKDLSRDDYSYNEDGRRYFMAVDYRF 659