Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., exogenous ferric siderophore receptor from Agrobacterium fabrum C58

 Score =  452 bits (1162), Expect = e-131
 Identities = 268/683 (39%), Positives = 383/683 (56%), Gaps = 55/683 (8%)

Query: 17  LMFSASAFAQDATKTD---ETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDAL 73
           L F+  AFAQ A++ +   + +VVTA+G+ Q +++APASI+V++REDLE   YRD+TDAL
Sbjct: 28  LGFAVPAFAQQASEGNTVLQQIVVTASGFEQNVKDAPASITVVTREDLEKGSYRDLTDAL 87

Query: 74  KSVPGVTVTGGGDTTDISIRGMGSNYTLILVDGKRQTSRQTRPNSDGPGIEQGWLPPLQA 133
           + V GV+VTG  +  D+ IRG+   YTLILVDGKRQ++R  R N +  G EQ ++PP+ A
Sbjct: 88  REVQGVSVTGIANEKDVFIRGLPGAYTLILVDGKRQSTRDARTNGNS-GFEQSFVPPVSA 146

Query: 134 IERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQLSTVVQENRASGDEQSANFF 193
           IERIEV+RGPMS+LYGSDA+GGVINIITRK    WSG+V     VQ++   G+    +++
Sbjct: 147 IERIEVVRGPMSSLYGSDAMGGVINIITRKVGDVWSGSVTTEGTVQQHSKFGNSGQVSWY 206

Query: 194 VTGP-LSDALSLQVYGQTTQRDEDEIEHGYGDKSLRSLTSKLNYQLNPDHQLQLEAGVSA 252
             GP L D L LQ++G+   R ED I +G           +L +  N DH + LE G + 
Sbjct: 207 ANGPILKDQLGLQLWGRGFTRGEDRILNGTTGAKEYDFNGRLTFTPNEDHDIYLEGGKTR 266

Query: 253 QDRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAVSHQGDWQDVGQSDTYLQ-YEENTNKS 311
             R+   G +  ++   GT     N   R+H ++SH G W       ++ Q + E TN +
Sbjct: 267 LRRDAEPGDTLAATDANGTY----NTNTRDHWSLSHTGRWGPTTSEFSFQQEWAERTNFT 322

Query: 312 REM------------SIDNTVFKSTLVAPI---GEHMLSFGVEGKHESLEDKTSNKISSR 356
           R               I NTV       P    G H L  G +     L D+   + + R
Sbjct: 323 RNTRTGRVTENPRSPEIRNTVLDGKFTTPFELFGNHTLVTGGQYFEARLTDQNPGRRTDR 382

Query: 357 TH-ISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKNYGSHFSPRVYGVWNLDPLWTVKGG 415
               S TQWA F+EDEW + + F LT G RLD+ + YG+HFSPR+YGVW+     T+KGG
Sbjct: 383 DETFSATQWALFLEDEWRIVDNFALTGGLRLDNHEKYGNHFSPRLYGVWSATEELTIKGG 442

Query: 416 VSTGFRAPQLREVTPDWGQVSGGGN-----------IYGNPDLKPETSINKELSLMYSTG 464
           VSTGFRAP++R++ P +   +GGG            I G+P+L+ E S + E++ ++  G
Sbjct: 443 VSTGFRAPEIRQIAPGYAYTTGGGGCSYGPSGTCGVIIGDPNLEAEKSTSYEIAALWDNG 502

Query: 465 SGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRV----NIDEAETYGAEAT 520
             +A   T F+ DFKDKI+         T  P +W     YR+    NID+A   G E T
Sbjct: 503 D-IALGATYFYTDFKDKISNALVLNPDGT--PARWSEDRNYRLWYNYNIDDAIIQGVELT 559

Query: 521 LSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQT-TDRLNSWANLN 579
            +   T  + L  +YTYTHSEQK+G++ G PL + P+H+ N    W T  D L +W +LN
Sbjct: 560 ATWYATSELTLRGNYTYTHSEQKTGDYEGFPLARTPEHMANLRGDWVTPIDGLEAWVSLN 619

Query: 580 YRGKEMQ--PEGGASNDDFIA--------PSYTFIDTGVTYALTDTATIKAAVYNLFDQE 629
           Y G E+   P  GA+               +YT +D G  YA+ +   + AAVYN+FD++
Sbjct: 620 YHGSEINAGPRIGANGTPVTINGQSGRKYDAYTTLDIGAKYAVAENVDLNAAVYNVFDKD 679

Query: 630 VNYAEYGYVEDGRRYWLGLDIAF 652
           V   ++  V +GRR+W+ +   F
Sbjct: 680 VGTDDFNTVMEGRRFWISMTAKF 702