Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., LysR substrate-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  108 bits (269), Expect = 2e-28
 Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 6/298 (2%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           +QDL+ +  F A+ +H   +AA +AL  PKS LS+R+AQLEE LG  LL R   R  +T+
Sbjct: 8   LQDLNDLYFFAAVVEHGGFSAAGRALGVPKSRLSKRVAQLEERLGVRLLQRTTRRFVVTE 67

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            GE F  +   +LE A  +Q+A+ EL  +  G + L    +L +  L+ VL +F+ Q+  
Sbjct: 68  VGERFYAHCRAVLEEAQAAQDAVDELRAEPRGVVRLSCPVSLAQTVLAHVLPDFLAQYPK 127

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRK--ERLGYWRYAAYASPKYLAHRDKP 177
           +++RLLS  +  D + E  DL I +               G  R    ASP  L    +P
Sbjct: 128 MQVRLLSGNRRVDVIGEGYDLAIRVRTKLDTDANLVIRTFGLSRTKLVASPALLKALGRP 187

Query: 178 THPRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIG 237
             P +L   P +       A+L       G+ +   +++RL + + A+  +A  +G G+ 
Sbjct: 188 VQPDDLARLPALSMSEHEGAQLWELIGANGAQTSVEVQARLITGDFAVLLEAARRGMGVA 247

Query: 238 LLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRHPL-RLRLFIDALRQARP 294
           LLP +       A  G L   +  W      ++  YP  R  L  +R  +D L +  P
Sbjct: 248 LLPEFVCAPAIAA--GELEVVLPEWSVPEGTMHFVYPSRRGMLPGVRALVDFLAERLP 303