Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., LysR substrate-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 79/297 (26%), Positives = 124/297 (41%), Gaps = 5/297 (1%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           MQDL+ +  F  + +  S TAA+KAL   KS LS R+A+LE  LG  L+ R   R  + +
Sbjct: 1   MQDLNDIYYFVQVVELGSFTAASKALGVAKSQLSFRVARLETSLGIRLIQRTTRRSHVNE 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            G+ +      LL  A ++Q  + E      G + +     L +  L+ +L EF++QH  
Sbjct: 61  IGQRYYEQCRLLLAAAEQTQRVIDEAQAAPRGRIRVACPVLLAQLLLAPILIEFLRQHPG 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWI-EHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPT 178
           +++ L     H D +    D+   + +            G       ASP+ L  + +PT
Sbjct: 121 VQVDLDICHHHVDVIAGGYDIAFGVRDSLRDSSLVMRSYGLDPQVLVASPELLRRQGQPT 180

Query: 179 HPRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGL 238
            P EL     +D I+             G          L SDNL +   A+  G G   
Sbjct: 181 QPLELKRLSSVDLISAEGRHFWHLQAADGRIQQVEHHPSLISDNLQVLYQAVVGGVGAAQ 240

Query: 239 LPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGR-HPLRLRLFIDALRQARP 294
           LP +     E    G ++P +  W      ++  YP    H   LR FID + ++ P
Sbjct: 241 LPQFVCR--EPIAEGRMVPLLPAWSLPAGNVHAVYPSRHGHTPALRSFIDFVGRSMP 295