Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 14/294 (4%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L     F A+ +  SLTAAA  L Q ++ +S  L +LE +LG +LL R   +L LT 
Sbjct: 1   MVSLDRFDTFKAVVEAGSLTAAADLLGQTRAVVSFNLKRLEAELGVTLLTRNTRQLALTD 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AGE F V   ++LE A  + E  +  + Q+ G L +          ++  ++ F + H  
Sbjct: 61  AGERFYVRCTRMLEEARLAVEEARSEHAQLKGTLRITTTVEYALAVVAPAVEAFRRLHPD 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKY--LAHRDKP 177
           L I L +   H+D + E  D+ I +       +R  +L  +   A A+P    ++  D+ 
Sbjct: 121 LNIHLSTSSTHADLISERFDVAIRLGRLLDSNHRAVQLSSFDVFAVAAPSLGGVSTLDEL 180

Query: 178 THPRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIG 237
               +L H         R  EL +  P+ G +      + L +D+ A+      +G G+ 
Sbjct: 181 EQLPKLGHG--------RLTELRVTDPQGGEHLYRPGHASLVADSAAVLQAFAVRGHGVA 232

Query: 238 LLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALR 290
           +LP W     +    G L+  +   +  P  +   YP  RH PL++R FID ++
Sbjct: 233 VLPQWLVK--DDLEAGRLVRLLPDHRFAPQGVYAMYPDTRHLPLKVRAFIDFMK 284