Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 70/301 (23%), Positives = 143/301 (47%), Gaps = 10/301 (3%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L  ++AF  + +  S TAAA  L+   + +SR ++ LE  L   LL R   R+ LT+
Sbjct: 1   MDTLQNMRAFSCVAEAGSFTAAAVQLDTTTANVSRAVSNLEAHLQTRLLNRTTRRIALTE 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHS- 119
           AG+ + +  EQ+L    +++    + + +  G+L +     + + ++   +  + + H  
Sbjct: 61  AGKRYLLRCEQILAYVEEAEAEASDAHARPAGQLKVHTMTGIGQHFVIDAIARYRRTHPD 120

Query: 120 -TLKIRLLSQFQH-SDEVFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKP 177
            T  + L ++     DE ++  +++  E     G+  +RLG     A ASP Y+  +   
Sbjct: 121 VTFDLTLANRVPDLLDEGYDVSIVLASE-LPDSGFVSQRLGITYSIACASPDYVKAKGCA 179

Query: 178 THPRELIHHPWIDFIA--CRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRG 235
             P++L++H  +  ++   +  +   + PE G  S+    S    ++      AI  G G
Sbjct: 180 QRPQDLLNHACLRLVSPVIQLDKWTFNGPE-GQESVAINTSPFLVNSADAMKTAITSGMG 238

Query: 236 IGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALRQARP 294
           +GLLP + A   E    G+L+  +  ++SQ   +   YP  ++   +++ +++ LR + P
Sbjct: 239 VGLLPVYAA--IEGLRNGTLVRVMPNYRSQELNLYAIYPSRQYLDAKIKTWVEYLRGSLP 296

Query: 295 D 295
           +
Sbjct: 297 E 297