Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 5/294 (1%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L+A+  F  + +  S +A A+ ++  + T+S+ L  LE +LG  L+ R   +L+LT 
Sbjct: 1   MDKLNAMAIFVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSLTD 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            G+ +  +  ++L   + ++ + Q     + G L +    +  R  ++  L +F+QQ+  
Sbjct: 61  EGQRYYSHCREILAAVDAAEHSFQTGKEAIAGPLRIGSSVSFGRLHIAARLSDFLQQYPD 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           +++ L       D V E  D+ + I      G    ++G       ASP YLA    P  
Sbjct: 121 VQVDLQLNDHLQDMVSEGLDVTLRIGELRDSGLIARQIGTTHRVTLASPDYLARHPAPQT 180

Query: 180 PRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLL 239
           P EL  H  + F         ++  E G+     +    QS+N     + +  G GI L 
Sbjct: 181 PHELSQHNCLLFNLLSSQNQWVYEKE-GTRQSVRITGNAQSNNSEAVREMVLTGLGIALS 239

Query: 240 PTWFANGFETAHPGSLIPCVNGWQSQPTEINCF-YPLGRHPLRLRLFIDALRQA 292
           P W    ++    G ++  +  + +Q   I+    P  R   R++ F+D +  A
Sbjct: 240 PLWLF--YDDLKAGRVVALLQDYTAQSLPIHAVSAPNRRQSARVKAFVDYMADA 291