Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., no description from Variovorax sp. SCN45

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 82/295 (27%), Positives = 126/295 (42%), Gaps = 23/295 (7%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           LS V+ F    Q   LT AA  L  PK++ SR+L +LE  +G  LL R   R  LT+ G 
Sbjct: 6   LSDVRLFTKAAQLGGLTPAADVLNVPKASASRQLQRLEATVGHLLLHRGSTRFALTEEGR 65

Query: 64  VFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKI 123
            F V ++ +L + +     L    + VTG L +VV     R  L   L  FM  H  L++
Sbjct: 66  EFLVAAQHVLTILDDVMLNLSSGGDAVTGRLRIVVPHYYGRELLMSHLPPFMTAHPRLEV 125

Query: 124 RLLSQFQHSDEVFEPDLIIWIEHAAPMGYRKERLGYWRYAAY----------ASPKYLAH 173
            + +    +D +F  +        A +  R+ R G     A           A+P YLA 
Sbjct: 126 VVETGNDRAD-LFRDE--------ADVAIRRGRDGCDELVARHLKDEPLMLCAAPDYLAP 176

Query: 174 RDKPTHPRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKG 233
                + ++   H ++     RR   E++           +ES  QSD+L +        
Sbjct: 177 HPAIENLQDFSRHVFLTTGEERRKR-EVNLATLDKTHRIRVESVFQSDDLELILQLALSA 235

Query: 234 RGIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFY-PLGRHPLRLRLFID 287
           RGI L+P   A        G L+P +   + +P EIN  Y P  R+  +++ F+D
Sbjct: 236 RGIALVPVSLAQ--PQLDMGLLLPVLPQVKLKPQEINLVYLPSRRNSPKIKTFVD 288