Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 9/294 (3%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L  ++ F  +  H S + AAK L+  K+T+S+ +A+LE   G  LL R    ++LT 
Sbjct: 1   MDSLDLIRTFREVASHGSFSQAAKRLDMSKATVSKYVAELETRFGVRLLNRSTRSVSLTD 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHS- 119
           AG++    S  +LE+   +Q  LQ+  +Q  G L +     +  G    +L +FM+ +  
Sbjct: 61  AGQLLLDRSTPMLEMVELTQSELQDRASQPGGRLRISAPHGMGSGEFPNLLADFMRYYPD 120

Query: 120 -TLKIRLLSQ-FQHSDEVFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKP 177
            T+ ++L ++    ++E  + +L       A +  RK RL        ASP Y     KP
Sbjct: 121 VTISLQLTNRTVDLAEEGIDVELRSGPVEDANLIVRKLRL--MNMVVCASPVYWKKHGKP 178

Query: 178 THPRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIG 237
            HPR+L  H  + F    +  +           +P ++SR+     A        G G+ 
Sbjct: 179 EHPRDLASHDALTFSLLGQQPVWRFDDNGTPLDVP-VKSRMDCTEGAPLIRVAMHGFGVI 237

Query: 238 LLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALR 290
            LP+           G L+P + G+  +   ++  Y   RH    LR  +D L+
Sbjct: 238 YLPSILVQSH--LDQGELVPVLQGYARKDMWLSAAYLQRRHNSAALRALLDFLQ 289