Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 18/301 (5%)

Query: 12  ALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGEVFAVYSEQ 71
           A+    SL  AA +L+   S +++RL  LE  LGQ L  R   RL++T  GE   ++++ 
Sbjct: 16  AIRDQGSLAGAADSLDVVPSVITKRLGALETRLGQRLFDRTTRRLSVTAEGEAVCLHAKT 75

Query: 72  LLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKIRLLSQFQ- 130
           LLE     +  L E  N++ G + L       R WL   L  F  +H  L+I LL   Q 
Sbjct: 76  LLEGFAALESELGERQNELVGTIRLAATFGFGRRWLGPALATFQTRHPALQIELLLTEQL 135

Query: 131 --HSDEVFEPDLIIW-IEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPRELIHHP 187
              S E ++  + +W ++      +   R+   +    ASP YLA R  P     L  H 
Sbjct: 136 PELSAEGYDGAIWLWAVQQPRAADWVTRRIARNQRVLAASPDYLARRGVPATAEALASHD 195

Query: 188 WIDFIACRRAEL--------ELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLL 239
            +  +A    E+         L H   GS +   ++ RL S++  M  D    G G+ L 
Sbjct: 196 CL--VARENGEVNQRQFTLWSLRHARDGSTARVRVQGRLASNSGEMVRDWCLAGHGVMLR 253

Query: 240 PTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYP-LGRHPLRLRLFIDAL-RQARPDEW 297
             W  +       G L+  +  +     +I+   P   + P R+RL +D L  Q R + W
Sbjct: 254 SLW--DIAPQLASGELVRVLPQYAMADADIHWVAPWRPKTPRRVRLLVDHLAEQFRSEPW 311

Query: 298 Q 298
           +
Sbjct: 312 K 312