Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., Transcriptional regulator PA4174, LysR family from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 80/301 (26%), Positives = 125/301 (41%), Gaps = 23/301 (7%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M    A++AF  + +  S T AA  L   K+T+++ + QLE  L   LL R   ++ +T 
Sbjct: 1   MDRFDAMQAFARVVEAGSFTKAADTLHMSKTTVTQLVQQLEARLRVKLLNRTTRKVNVTA 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            G  +     +LL   + ++ +L   +    G L + V   L R  L   L  F  +H  
Sbjct: 61  DGAAYYERVVRLLADMDDAETSLSGASASPRGRLRVDVPSPLARMILVPALPAFHARHPD 120

Query: 121 LKIRLLSQFQHSDEVFE-PDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           +++ +    +  D + E  D ++             R+G  +   YA+P YLA    P H
Sbjct: 121 IQLDMGVSDRVVDVIGENVDCVVRGGELTDQSLMARRVGDLQLGVYAAPSYLALAGTPAH 180

Query: 180 PREL--IHHPWIDFIACR----------RAELELHHPEFGSYSLPALESRLQSDNLAMQA 227
           PREL   HH  + F+  R          R E +      G Y L         D  A  A
Sbjct: 181 PRELEDTHHRIVGFLWSRNGKTFPYAIWREEGDERIEVQGRYVLSV------DDGNAYLA 234

Query: 228 DAIAKGRGIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFI 286
             +A G G+  LP + A     +  G L+P    W+  P  +   +P  RH   +LR+FI
Sbjct: 235 AGLA-GLGVLWLPDYMARPHLAS--GELVPLFQDWRLDPMPLYLAFPPNRHVSAKLRVFI 291

Query: 287 D 287
           D
Sbjct: 292 D 292