Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (253), Expect = 1e-26
 Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 9/287 (3%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           L  +  F  + ++ S T+ +K    P +T++RR+  LE+ L   LL R   +LTLT+AGE
Sbjct: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70

Query: 64  VFAVYSEQLLE-LANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLK 122
            F      LLE LA+ ++E   E     +G + +    NL +  +  + + FM+++  + 
Sbjct: 71  RFYKDCSPLLERLASMTEEITDECRG-ASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIH 129

Query: 123 IRLLSQFQHSD-EVFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPR 181
           I L+   Q  D +  E D+I  +           ++G  +    ASP+YL+   +PTH  
Sbjct: 130 IELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAE 189

Query: 182 ELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLLPT 241
           EL  H  +      + +L       G   + +   R Q+  L +   A ++G GI L+P 
Sbjct: 190 ELHQHQLLKGYPLLKWQLTNSQ---GETVVNSDRGRFQASALNVVRSACSEGLGITLMPD 246

Query: 242 WFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFID 287
                F     GSL+  ++ W S P +I   Y    H P ++RLFID
Sbjct: 247 VMLREF--LEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFID 291