Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  102 bits (254), Expect = 1e-26
 Identities = 95/307 (30%), Positives = 141/307 (45%), Gaps = 29/307 (9%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           L  ++AF ++   +S  AAA+AL +  S ++R +  LE++ G  LL R  N +TLT+AGE
Sbjct: 18  LREIQAFVSVAHKRSFVAAARALGRSPSAVTRAVQTLEDNAGSKLLNRNANAVTLTEAGE 77

Query: 64  VFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKI 123
               ++E+LL++   + + L  L+    G +       L    L QVL EF ++H  + +
Sbjct: 78  RLLPHAERLLDVQRDAADELAALSGNAQGWIRFAAPQLLGEHVLPQVLAEFSRRHPQVTL 137

Query: 124 RLLSQFQHSDEVFEP-----DLIIWIEHAAPMGYRKERLGY--WRYA--AYASPKYLAHR 174
                 Q+SDE  +P     D +  +  A P     E +GY  W Y    YASP YLA  
Sbjct: 138 ----DVQYSDEALDPLQGKFDFV--VRGAFPQS--SELIGYPLWPYRRHLYASPAYLALA 189

Query: 175 DKPTHPRELIHHPWIDFIACR--RAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAK 232
             P HP +L  H  I   A R  +A    H+ +  S   P    RL S   A+    +A 
Sbjct: 190 GTPQHPEDLDGHTLILHTAPRILKAWHFCHNDQITSLR-PRPRLRLGSGG-AVYHSTLA- 246

Query: 233 GRGIGLLPTWFANGFETAHPGSLIPC-----VNGWQSQPTEINCFYPLGRHPLRLRLFID 287
           G GI  L  W   G      G L+       +     Q  +++  YP G  P R+R  + 
Sbjct: 247 GAGIARLAAWV--GEAQVKAGRLVRVCPQYRLTSSSGQDPQMHAVYPAGELPTRVRDLLA 304

Query: 288 ALRQARP 294
           ALR+A P
Sbjct: 305 ALRRAGP 311