Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 32/305 (10%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L A+K F A    +  +AAA+ L    S+++R +  LE  LG +LL R   +++LT+
Sbjct: 1   MDKLLAMKMFVATVDAQGFSAAARRLGLATSSVTRLVDALEASLGATLLNRSTRQVSLTE 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AG  +   +  + E  +++  ++ +   +  G L L +     R  ++  L  F+ QH  
Sbjct: 61  AGARYYQRARGIFEALDEADASIADRGEEPVGVLRLSLPVEFGRRVIAPHLGPFLAQHPA 120

Query: 121 LKIRLLSQFQHSDEVFEP--DLIIWIEHAAPMGYRK-ERLGYWRYAAYASPKYLAHRDKP 177
           L++  +      D++ +   DL I +   +P       RLG ++    ASP YLA R+  
Sbjct: 121 LELD-IDLSDRLDDLLDGRYDLSIRLGDPSPNDELVCRRLGGFQRWLVASPAYLAGREPL 179

Query: 178 THPRELIHHPWIDF----------IACRRAELELHHPEFGSYSLPALESRLQSDNLAMQA 227
            HP+EL+ H  + F          + C +  LEL            +   L+S N  M  
Sbjct: 180 QHPQELLDHACLRFRYGQKARPWRLTCGQDSLELD-----------VSGPLRSANADMLR 228

Query: 228 DAIAKGRGIGLLPTWFANGFETAHPGSLIPCVNGWQSQP----TEINCFY-PLGRHPLRL 282
           +    G GI LL  W     E    G L      WQ+ P    + IN  Y P  R   R+
Sbjct: 229 ETALAGSGIALLADWLVR--EDVLAGRLQRIFPDWQASPGAANSSINALYMPNHRGSRRV 286

Query: 283 RLFID 287
             FID
Sbjct: 287 NAFID 291