Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., HTH-type transcriptional activator AaeR from Escherichia coli ECRC62

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 7/292 (2%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M+ L  +  F  + +  S TAAA+ L+   S++S+ +++LE++L   LL R    + LT+
Sbjct: 1   MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTE 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AG ++     ++L       E L   NN   G L +     + +  L+ +  + ++++  
Sbjct: 61  AGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPG 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           L + L++     D + +  D++I +           RLG       A+  YL     P  
Sbjct: 121 LSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPEK 180

Query: 180 PRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLL 239
           P +L  H W+++      E EL  PE G  +    + R  +++       +  G GI  +
Sbjct: 181 PADLSSHSWLEYSVRPDNEFELIAPE-GISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYV 239

Query: 240 P-TWFANGFETAHPGSLIPCVNGWQSQPTEINCFY-PLGRHPLRLRLFIDAL 289
           P  W  N         L+P    +QS P  +   Y    + PL++++ I++L
Sbjct: 240 PLMWVINEINRGELEILLP---RYQSDPRPVYALYTEKDKLPLKVQVVINSL 288