Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 11/277 (3%)

Query: 18  SLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGEVFAVYSEQLLELAN 77
           SL+AAA+ L    S +SRR+AQ+E  LG  LL R   R+ LT AG  F + +  +L   +
Sbjct: 18  SLSAAAERLGLSASAISRRIAQMENRLGTRLLARTTRRIALTDAGATFCLRARAILAALD 77

Query: 78  KSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHS--TLKIRLLSQFQH-SDE 134
           +++++L E+  +  G L + +     +  ++ +L  +++++   +L++ L  + Q   +E
Sbjct: 78  EAEQSLTEMGEEPRGTLRITMPVLFGQMRVAPLLASYLRRYPGVSLEVSLNDRVQRLVEE 137

Query: 135 VFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPRELIHHPWIDFIA- 193
            F  DL I     A       RL   R    ASP YL  R  P  P +L+ H  +  ++ 
Sbjct: 138 GF--DLAIRAGRLADSSLIARRLRPLRRHVVASPDYLERRGVPQSPADLVRHECLTLLSG 195

Query: 194 CRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLLPTWFANGFETAHPG 253
             R E E    +      P+     Q+D+L +   A   G G+  L  +     E    G
Sbjct: 196 SGRTEWEFMAGDRREILRPS--GSFQADSLWLLRHAAVGGLGLARLADFIVE--EDIRAG 251

Query: 254 SLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDAL 289
            L+P ++  +     I+  YP  RH   ++R FI+ L
Sbjct: 252 RLVPLLSELEVTDEAIHVVYPATRHVSPKVRSFIEHL 288