Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

 Score =  103 bits (256), Expect = 7e-27
 Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 10/297 (3%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           MQDL+   AF  + +  S T AA+ L  PK+TLSR++  LE+ LG  LL R   R+ LT+
Sbjct: 1   MQDLNDTIAFVKVVEEGSFTKAARRLRLPKTTLSRKVRDLEQRLGIQLLHRTTRRIGLTE 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AG V+     ++ E   +++ A+ +L +   G L +   P+     ++ +L +F  ++  
Sbjct: 61  AGTVYFERCRRIAEELEQAESAVAQLRDAPRGWLRITTPPSFGMTVIAPLLPDFRSRYPD 120

Query: 121 LKIRLLSQFQHSDEVF-EPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           ++I L+   ++ D V  + DL I +           +LG      YA+P Y A    P H
Sbjct: 121 VRIDLVLSHENLDLVARDIDLAIRMGALQDSSMAARKLGVLHRHVYAAPSYCAAHGLPVH 180

Query: 180 PRELIHHPWIDFIACRRAE------LELHHPEFGSYSLPALESRLQSDNLAMQADAIAKG 233
           P  LI H  +  +  RR              + G      ++  + +D+  M    +  G
Sbjct: 181 PDALIRHLTLANMTARRPSGFGWRLFRTDGGQPGDGVDAVIDPVMSADDPEMLVPTLLAG 240

Query: 234 RGIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGR-HPLRLRLFIDAL 289
            G+ L   +    + +A  G +   ++GW+    +++  +P GR  P ++R F+D L
Sbjct: 241 GGLVLATDFAMRSYRSA--GQVQRVLDGWKGADVDLHAVFPGGRIQPPKVRSFLDFL 295