Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 18/298 (6%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  LS +K F  +    S T AA+ L+     +S+ +A+LE+ L   L  R   ++ LT+
Sbjct: 1   MDKLSLLKTFCVVANEGSFTKAAEKLDTSNQLVSKYVAELEKQLDTRLFNRTTRKIHLTE 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AG+    ++  +LE     +  L  LN +V G L +    +     L+  L  F Q H  
Sbjct: 61  AGQQCLQHANHILESVTDMESQLGLLNTEVKGVLHVSAPVSFSTLHLASALSAFQQAHPH 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           + I L    +  D + E  D+ I   H A      +++   + A  ASP YL     P H
Sbjct: 121 VSINLQLNDRKIDVIDEGFDVAIRAGHLANSSLVAKKITTIKLALCASPAYLEKYGTPQH 180

Query: 180 PRELIHHPWIDFIACRRAELELHHPEFGSYSLPALES-------RLQSDNLAMQADAIAK 232
           P EL    ++++         +++    S  + AL++       +L ++N  +  +   +
Sbjct: 181 PAELKPEHYLEY-------SYVNYDNDKSVLIAALKANAQTVTPKLTANNGEVLTNVAKQ 233

Query: 233 GRGIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGR-HPLRLRLFIDAL 289
           G G  L PT+ A   E    G L+  ++ +  Q   +   YP  +    +LR+FID L
Sbjct: 234 GEGYVLQPTFIAG--EALKNGELVSILDDFVPQAISLYAVYPHRKLISNKLRVFIDFL 289