Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score =  181 bits (460), Expect = 9e-51
 Identities = 102/243 (41%), Positives = 143/243 (58%), Gaps = 2/243 (0%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MR  RI+  +P+     + L   AA H+ RVLRM  G  + +F+G G ++ A+I  +GK+
Sbjct: 1   MRTIRIHLDQPLAVAAELNLPAQAAEHVARVLRMNPGDPLTVFNGDGHDYAAIILAMGKR 60

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
           ++ V I  +     ESPL L L Q ++RG+KM+  +QK+ ELGV  I PLL+ER  VKLD
Sbjct: 61  ELSVRIESKQLVRNESPLPLTLAQGVARGEKMDLIVQKATELGVARIVPLLTERSEVKLD 120

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTE--ALKLNLHPRAKYS 178
             R E+++  W+ +  SACEQ GR  +PE+ P + L AW  +  +  AL+L L P A  +
Sbjct: 121 ATRAERRLAHWRAVVASACEQSGRARLPEVAPALPLAAWLHDLADDGALRLALLPEAGRA 180

Query: 179 LNTLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVR 238
              L    +   L++GPEGGL   ++       FE   LGPRVLRTETA L A+AALQ  
Sbjct: 181 SRELRFTAAGGLLVVGPEGGLGERDVGALGAAGFEGLQLGPRVLRTETAGLAALAALQAL 240

Query: 239 FGD 241
            GD
Sbjct: 241 HGD 243