Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 9/221 (4%)

Query: 20  LSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKKQVLVNITERVENSIESPLD 79
           LSE+ + H  RVLR+  G  V L DG+G  + A+I +  +K+  + + ++     + P  
Sbjct: 16  LSEEESKHCTRVLRLSHGDTVYLIDGVGGLYTAIIQDAHQKRCQLQVVDKQIEYGKLPYV 75

Query: 80  LHLGQVISRG-DKMEFTIQKSVELGVTTITPLLSERCGVKLDEKRFEKKIQQWQKIAISA 138
            H+    ++  D+ME+ ++K+VE+GV+ IT LL E        +R   ++ + +KIA+SA
Sbjct: 76  SHIAVAPTKNMDRMEWFVEKAVEIGVSEITFLLCEH------SERRNLRLDRLEKIAVSA 129

Query: 139 CEQCGRNTVPEIRPIMDLEAWC--AEPTEALKLNLHPRAKYSLNTLPTPVSKVRLLIGPE 196
            +Q  +  +P +  +     +   A P      +L   A   +           ++IGPE
Sbjct: 130 MKQSQKGYLPLLNDMTPFHRFVQKAVPENTFIAHLEDDATKGIKDHYKYGQPHCIMIGPE 189

Query: 197 GGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQV 237
           G  S +EI    +   +   LG   LRTETAAL A  +L V
Sbjct: 190 GDFSLQEIAAAYKAGIQPVTLGQSRLRTETAALVACHSLHV 230