Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  330 bits (845), Expect = 2e-95
 Identities = 170/243 (69%), Positives = 188/243 (77%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MRIPRIYHPE +     ++L EDAA HIGRVLRM  GQ + LFDG    F A I    KK
Sbjct: 17  MRIPRIYHPELLTSGTQISLCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEIISASKK 76

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
            V V + +   +  ESPL +HLGQV+SRG+KMEFTIQKS+ELGV+ ITPL SERCGVKLD
Sbjct: 77  SVEVQVMKGEIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD 136

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
            +R  KK QQWQKIAI+ACEQCGRN VPEIRP M LEAWCAE    LKLNLHPRA  S+N
Sbjct: 137 SERLNKKRQQWQKIAIAACEQCGRNRVPEIRPPMALEAWCAEQDSGLKLNLHPRAHASIN 196

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
           TLP PV +VRLLIGPEGGLSA+EI MT RYQF + LLGPRVLRTET ALTAI ALQVRFG
Sbjct: 197 TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG 256

Query: 241 DLG 243
           DLG
Sbjct: 257 DLG 259