Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., RNA methyltransferase, RsmE family from Kangiella aquimarina DSM 16071

 Score =  218 bits (554), Expect = 1e-61
 Identities = 114/242 (47%), Positives = 157/242 (64%), Gaps = 2/242 (0%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MRIPRI+  + +     + L ++A  H+ RVLRM  GQ++ LF+G G  +   I  V + 
Sbjct: 1   MRIPRIFTTQQLTPSSELLLEKEAGNHVSRVLRMTVGQQLELFNGDGNSYFCNILSVERN 60

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
           QV V+I E   ++ ESPL++HL Q +SRGDKME T+QK VELGV   TPL++ERCGVKLD
Sbjct: 61  QVSVHIVESKSSNNESPLNIHLYQGVSRGDKMELTLQKGVELGVKQFTPLITERCGVKLD 120

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
           +KR++KK + WQK+  SACEQCGRNT+P + P++ L+A       A    +HP AK    
Sbjct: 121 DKRWQKKHEHWQKVIESACEQCGRNTIPILHPVIKLQA-ALTHLNANSFFMHPEAKTGFK 179

Query: 181 TLPTPV-SKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRF 239
           ++   + S+++L +GPEGG S EEI     +      LGPRVLRTETAAL A+A +   +
Sbjct: 180 SISANIDSEIQLWVGPEGGFSDEEISSVTAHGCNPVQLGPRVLRTETAALAAVAVMNSVW 239

Query: 240 GD 241
           GD
Sbjct: 240 GD 241