Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 95.5 bits (236), Expect = 9e-25
 Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 25/250 (10%)

Query: 5   RIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKKQVLV 64
           R+Y   P+     VA + D + ++ +V+R++AG ++L+F+G   E+   ++EV KK V++
Sbjct: 3   RLYVTSPLAAAAPVAPTLDQSRYLTQVMRLKAGDDLLVFNGRDGEWRCTVAEVLKKGVIL 62

Query: 65  NITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLDEKRF 124
              E+V      P DL L   + +  ++E  ++K+ ELG   +  +L++R          
Sbjct: 63  RAEEQVRPQTFGP-DLELIVSVVKKARVETIVEKAAELGARRVRLVLTKRTNAD------ 115

Query: 125 EKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEA------------WCAEPTEALKLNLH 172
             ++ +   IA  A EQ GR  VP +   + L+A            +C E   A  ++  
Sbjct: 116 RIRLDRLDAIAEEAAEQTGRMDVPAVGDPIKLDALLDGWETGRRLMFCDETGGAPAISAL 175

Query: 173 PRAKYSLNTLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETL-LGPRVLRTETAALTA 231
             A            K  +LIGPEGG S EE +  R   F   + LGPR+LR +TAA+ A
Sbjct: 176 AAAGAGAQE-----QKWSILIGPEGGFSPEEGERLRSLPFTTAVSLGPRILRADTAAIAA 230

Query: 232 IAALQVRFGD 241
           +   Q   GD
Sbjct: 231 MTLWQAAVGD 240