Pairwise Alignments

Query, 140 a.a., Holliday junction resolvase RuvX from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., Putative pre-16S rRNA nuclease from Azospirillum sp. SherDot2

 Score = 45.1 bits (105), Expect = 5e-10
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 17/142 (11%)

Query: 2   SRTVMAFDYGTKSIGSAIGQEITGTASPLKAFKANDGIPNWDEIEKQIKEWQPNLLIVGL 61
           ++ ++  D GTK++G A+       ASP+   K      +  E+ K I+++    L+VGL
Sbjct: 15  NQRLLGLDVGTKTVGLAVADPGLIVASPIGTLKRTKFTQDARELGKTIRDYSIGGLVVGL 74

Query: 62  PTDLHGKDLDTITPRA---KKFAQRLHGRFGL-----PVELHDERLSTTEARAELFAMGG 113
           P ++ G    T  PRA   + FA  L  R  L      +   DERLST  +  E F +G 
Sbjct: 75  PLNMDG----TEGPRAESVRAFANNLLERSDLLGWDAEIAFWDERLST--SAVERFMIGE 128

Query: 114 YKALSKGN---VDCQSAVIILE 132
                K     VD  +A  IL+
Sbjct: 129 ADMTRKRRDEVVDKMAAAYILQ 150