Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., PilT/PilU family type 4a pilus ATPase from Rhodanobacter sp000427505 FW510-R12

 Score =  378 bits (970), Expect = e-109
 Identities = 188/355 (52%), Positives = 265/355 (74%), Gaps = 2/355 (0%)

Query: 2   ELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEA-LSVADVTALLHAMMDDARQA 60
           +   +L  M+  KASDL+IT G     +V G +    ++ LSV     ++  +M   ++ 
Sbjct: 5   DFTSFLKLMVHKKASDLFITAGVAPSMKVQGRIVPITQSPLSVQQARDMVLNVMTPGQRE 64

Query: 61  EFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIA 119
           EF++T E  FA+  +  GRFRVS F+QR   G V+RRIE++IPT EEL LP V++ LA+ 
Sbjct: 65  EFEKTHECQFAISAQGVGRFRVSCFYQRNCVGMVLRRIESKIPTIEELTLPPVIKQLAMT 124

Query: 120 KRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLD 179
           KRG+++ VGATGSGKST++AAM GYRNQ+ TGHI+T+EDPIE+VH+H+ CI+TQREVG+D
Sbjct: 125 KRGIIVFVGATGSGKSTSLAAMIGYRNQNSTGHIITIEDPIEYVHKHEGCIITQREVGID 184

Query: 180 TESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERIL 239
           T+S++ ALKN+LRQAPD+I+IGE+R+RE M++A+ FAETGHL + TLHANNANQA++RIL
Sbjct: 185 TDSWDNALKNTLRQAPDVIMIGEVRTREGMDHAIAFAETGHLVLCTLHANNANQAMDRIL 244

Query: 240 HLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHE 299
           H  P+++R+Q L+DLSLNLKG++AQQL+   +GK R    E+LL +P + D IR+GE+H+
Sbjct: 245 HFFPEDRRQQLLMDLSLNLKGIVAQQLIPTPDGKARRVAVEILLGTPLVQDYIRQGEIHK 304

Query: 300 LKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRGDD 354
           LK  M  S  +GM+TFDQ+L +L    +IS +DAL  ADS+N++RL +K  +G D
Sbjct: 305 LKEVMKESTLLGMKTFDQSLVELYHAGEISYEDALRYADSSNEVRLRIKLAQGGD 359