Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., type II secretion system ATPase GspE from Rhodanobacter sp000427505 FW510-R12

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 33/311 (10%)

Query: 3   LNQYLDGMLTHKASDLYITV---GAPILYRVDGELRAQGEALSVADVTALLHAMMDDAR- 58
           +N  L   +  +ASD++I        + YR+DG L  + EA   +   A++  +   AR 
Sbjct: 198 VNLILQRAVEQRASDVHIEPFENRLKVRYRIDGVLH-EVEAPPSSSTAAVISRVKIMARL 256

Query: 59  ---QAEFKQTREANFAVVRDSGRFRVSAFFQRELPGAVIRRI---ETRIPTFEELKLPEV 112
              +    Q       V       RVS         +V+ RI   E+ +  F  L   + 
Sbjct: 257 NIAERRLPQDGRIQLRVQGKELDLRVSTV-PTSFGESVVMRILDRESVVFDFASLGFTDR 315

Query: 113 LQNLAI----AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKR 168
            Q   +       G++LV G TGSGK+TT+       N +    I+TVEDP+E+  E   
Sbjct: 316 FQQRFVDVLERPHGILLVTGPTGSGKTTTLYTALSRINTNDV-KIITVEDPVEYQLEGIN 374

Query: 169 CIVTQREVGLDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHA 228
            I  + ++GLD   +  AL++ +RQ PD+I+IGE+R  ET   A+  A TGHL ++TLH 
Sbjct: 375 QIQVKPQIGLD---FSGALRSIMRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHT 431

Query: 229 NNANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRI 288
           N+A   + R+L +      E +LL  ++N  G++AQ+L+R  +        E  +    +
Sbjct: 432 NSAAGGITRLLDM----GVEDYLLGSTIN--GILAQRLVRRLDP-------ETAMPYDAL 478

Query: 289 ADLIRRGELHE 299
            ++I + ELH+
Sbjct: 479 PEVIEQFELHK 489