Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., twitching motility protein PilT from Pseudomonas simiae WCS417

 Score =  241 bits (616), Expect = 2e-68
 Identities = 136/345 (39%), Positives = 210/345 (60%), Gaps = 3/345 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGEL-RAQGEALSVADVTALLHAMMDDARQ 59
           M++ + L   +   ASDL+++ G   + RVDGE+   +G  LS   V  LL  +++  +Q
Sbjct: 1   MDITELLTASVHRGASDLHLSAGLAPMLRVDGEVWPLEGPVLSPPQVADLLSPLLNQHQQ 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            +F+ + E +FA  + D  RFR + F Q     AV R I + + + E L L EV Q +A 
Sbjct: 61  KDFETSLETDFAFELPDVARFRANVFRQDRGLSAVFRTIPSEVRSLESLGLGEVFQRIAQ 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGLVLV G TGSGKSTT+AAM  + NQHR  HILT+EDPIEF+H  K  ++ QR+V  
Sbjct: 121 LPRGLVLVTGPTGSGKSTTLAAMIDFLNQHRRHHILTLEDPIEFIHTPKMALINQRQVHR 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT  + VAL+++LR+ PD+IL+GE+R  ET+  A+T AETGHL   TLH ++A + ++R+
Sbjct: 181 DTHGFSVALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P  ++      LS +L+ V++Q L++ K G GR    E++L +P I +LIR  ++ 
Sbjct: 241 VDVFPAGEKAMVRSMLSESLQAVVSQVLVK-KIGGGRVAAHEIMLGTPAIRNLIREDKVA 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDL 343
           ++ + +     +GM+T D +L  LV +  +S +DA   A    D+
Sbjct: 300 QMVSAIQTGGALGMKTLDMSLKVLVGEGLVSREDAREKARVPTDI 344