Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., PilT/PilU family type 4a pilus ATPase from Variovorax sp. OAS795

 Score =  298 bits (763), Expect = 2e-85
 Identities = 155/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 10  MLTHKASDLYITVGAPILYRVDGE-LRAQGEALSVADVTALLHAMMDDARQAEFKQTREA 68
           M   KASD+Y++  +P+L R++G  +    + L      ALL  ++ +AR  E +   E 
Sbjct: 11  MAERKASDIYLSAHSPVLMRINGTCVPINAQVLPATAPIALLAEVVPEARIQELENKGEL 70

Query: 69  NFAVVRD-SGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIAKRGLVLVV 127
           N AV+ + +G +R+SA  QR     V+R I + IP+F +L LP++L+ L + KRGL+L+V
Sbjct: 71  NMAVMLEGAGNYRISAMRQRGSYAVVVRHIASTIPSFADLNLPDILKTLIMEKRGLILMV 130

Query: 128 GATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLDTESYEVAL 187
           GATG+GK+TT+A+M  YRN+H TGHILTVE+PIEF + +K+ +V QR+VG DTES +VAL
Sbjct: 131 GATGAGKTTTLASMLDYRNEHATGHILTVEEPIEFTYTNKKSLVNQRDVGSDTESLQVAL 190

Query: 188 KNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERILHLVPKEQR 247
           KN+LRQAPD+I IGEIR RETM  A+ +A++GHLC+ATLHANN+ +AL RIL   P E R
Sbjct: 191 KNALRQAPDVIQIGEIRDRETMTAAIAYAQSGHLCVATLHANNSYRALNRILSFFPVEVR 250

Query: 248 EQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHELKATMARS 307
              L DL   L+ +++Q+LLR  +G GR    EV+LN+  +A+LI +G+   +K  M +S
Sbjct: 251 PTLLGDLGSALRAIVSQRLLRTPSG-GRVPALEVMLNTALVAELIEKGDFSAVKEAMEQS 309

Query: 308 QEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTK 350
              G QTF++ + +L+ +++++ ++ L  ADS  +L   L+ +
Sbjct: 310 MAEGSQTFEEDIARLITEERVTREEGLAQADSPTNLMWRLQNR 352