Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., PilT/PilU family type 4a pilus ATPase from Variovorax sp. OAS795

 Score =  379 bits (974), Expect = e-110
 Identities = 192/363 (52%), Positives = 270/363 (74%), Gaps = 6/363 (1%)

Query: 3   LNQYLDGMLTHKASDLYITVGAPILYRVDGEL-RAQGEALSVADVTALLHAMMDDARQAE 61
           +N  L  M++   SDL+IT   P   +VDG++ +   +AL      AL  ++M+D + AE
Sbjct: 10  INDLLKLMVSRNGSDLFITADFPPAIKVDGKVTKVSQQALGAQHTLALTRSVMNDRQTAE 69

Query: 62  FKQTREANFAVVRDS-GRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIAK 120
           F++T+E NFA+     GRFRV+AF Q+   G V+R I  ++PT + L +P+VL+++++ K
Sbjct: 70  FERTKECNFAISPTGIGRFRVNAFVQQGKVGMVLRTIPAKLPTIDGLGMPQVLKDVSMTK 129

Query: 121 RGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLDT 180
           RGL ++VGATGSGKSTT+AAM  +RN++  GHI+TVEDP+EFVH HK C+VTQREVG+DT
Sbjct: 130 RGLTIMVGATGSGKSTTLAAMIDWRNENSYGHIVTVEDPVEFVHPHKNCVVTQREVGIDT 189

Query: 181 ESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERILH 240
           +S+E ALKN+LRQAPD+IL+GEIR RETME+A+ FAETGHLCMATLHAN+ANQAL+RI++
Sbjct: 190 DSWEAALKNTLRQAPDVILMGEIRDRETMEHAVAFAETGHLCMATLHANSANQALDRIIN 249

Query: 241 LVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHEL 300
             P+E+R Q L+DLSLNL+ +++Q+L+  ++G GR    EVLLN+P I+DLI +GE+ E+
Sbjct: 250 FFPEERRAQLLMDLSLNLRSLVSQRLIPTEDGLGRVAAVEVLLNTPLISDLIFKGEVGEI 309

Query: 301 KATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTK----RGDDYG 356
           K  M +S+ +GMQTFDQAL+ L     I+ +DA+ +ADSANDLRL +K      R  D  
Sbjct: 310 KEIMRKSRNLGMQTFDQALFDLFESHSITFEDAIRNADSANDLRLQIKLNSQRARSTDLA 369

Query: 357 SGS 359
           +G+
Sbjct: 370 AGT 372