Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., type IV pilus twitching motility protein PilT from Variovorax sp. OAS795

 Score =  270 bits (689), Expect = 6e-77
 Identities = 147/335 (43%), Positives = 216/335 (64%), Gaps = 2/335 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M++ Q L   + +KASDL+++ G P + RV G++R    +AL    V A+++ +M D  +
Sbjct: 1   MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVDALDHKAVHAMVYDIMSDTHR 60

Query: 60  AEFKQTREANFAVVRDS-GRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
             +++  E +F+   D   RFRV+AF Q     AV R I ++I T E+L  P++   LA+
Sbjct: 61  KHYEEFLEVDFSFEIDGLARFRVNAFNQARGAAAVFRTIPSKILTLEQLNAPKIFAELAL 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGLVLV G TGSGKSTT+AAM  Y N++  GHILTVEDPIEFVHE K+C++ QREVG 
Sbjct: 121 KPRGLVLVTGPTGSGKSTTLAAMVNYLNENEYGHILTVEDPIEFVHESKKCLINQREVGP 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
            T S+  AL+++LR+ PD IL+GE+R  ET+  AMT AETGHL   TLH ++A + ++RI
Sbjct: 181 MTLSFSNALRSALREDPDAILVGELRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P E++E     LS +L+ VI+Q L + K+G+GR    E++L +P I +LIR  ++ 
Sbjct: 241 IDVFPGEEKEMIRAMLSESLQAVISQTLCKTKDGQGRVAAHEIMLGTPAIRNLIREAKVA 300

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDA 333
           ++ + +   Q  GMQT DQ L +LV    IS  +A
Sbjct: 301 QMYSAIQTGQGAGMQTLDQNLTELVRRSAISAAEA 335