Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Twitching motility protein PilT from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  374 bits (959), Expect = e-108
 Identities = 186/348 (53%), Positives = 265/348 (76%), Gaps = 2/348 (0%)

Query: 3   LNQYLDGMLTHKASDLYITVGAPILYRVDGEL-RAQGEALSVADVTALLHAMMDDARQAE 61
           +N  L  ML+   SDL++T   P   +VDG + +   + L+     AL  A+M+D + AE
Sbjct: 10  INDLLRLMLSRSGSDLFLTADFPPAIKVDGSIVKVSPQPLNATHTLALARAIMNDKQAAE 69

Query: 62  FKQTREANFAVVRDS-GRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIAK 120
           F++++E NFA+   + GRFRV+AF Q+   G V+R I   +PT ++L LP+VL+++A++K
Sbjct: 70  FERSKECNFAISPPAIGRFRVNAFIQQGKVGMVLRTIPAVLPTIDKLGLPQVLKDVALSK 129

Query: 121 RGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLDT 180
           RGL ++VGATGSGKST++A+M  +RN++  GHI+TVEDPIEFVH HK C+VTQREVGLDT
Sbjct: 130 RGLCILVGATGSGKSTSLASMVDWRNENTHGHIITVEDPIEFVHPHKNCVVTQREVGLDT 189

Query: 181 ESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERILH 240
           +S+E ALKN+LRQAPD+IL+GEIR RE ME+A+ F+ETGHLC+ATLHAN+ANQAL+RI++
Sbjct: 190 DSWEAALKNTLRQAPDVILMGEIRDREAMEHAIQFSETGHLCLATLHANSANQALDRIIN 249

Query: 241 LVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHEL 300
             P+E+R Q L+DLSLNL+ +I+Q+L+  ++ KGRH   E++LNSP I+DLI +G++ E+
Sbjct: 250 FFPEERRAQLLMDLSLNLRALISQRLVPRQDNKGRHAAVEIMLNSPLISDLIFKGDVAEI 309

Query: 301 KATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLK 348
           K  M +S ++GMQTFDQAL+     + I+ +DAL +ADS NDLRL +K
Sbjct: 310 KEIMKKSTQMGMQTFDQALFNAFEANLITLEDALRNADSLNDLRLQIK 357