Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., type IV pilus twitching motility protein PilT from Serratia liquefaciens MT49

 Score =  230 bits (587), Expect = 4e-65
 Identities = 125/326 (38%), Positives = 200/326 (61%), Gaps = 4/326 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELR--AQGEALSVADVTALLHAMMDDAR 58
           M++ +++   + H ASDL++  G   + R+DGEL+  A  E L+   +  L +A++   +
Sbjct: 1   MDIGEFVALSVKHNASDLHLCTGHQPMLRIDGELQPLAGAEKLTETKMHRLCNALLQPQQ 60

Query: 59  QAEFKQTREANFAVVRDSG-RFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLA 117
           + + +Q  + + A+      R R + F Q       +R I    PT   L  P+++  L 
Sbjct: 61  RQQLQQQGQLDLALTLAGDIRLRANFFLQSLGVSLALRLIAGECPTLAALAAPDIIPALV 120

Query: 118 IAKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVG 177
             + GL+LV GATGSGKSTT+AAM    NQH+  HILT+EDPIEF+H  +  ++ QRE+G
Sbjct: 121 RREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHILTLEDPIEFIHRSRHSLIQQRELG 180

Query: 178 LDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALER 237
            D+ S++ AL+ +LR+ PD+IL+GE+R   T+  A+T AETGHL +ATLH  +A QA++R
Sbjct: 181 RDSHSFDDALRAALREDPDVILLGELRDTTTIRLALTAAETGHLVLATLHTRSATQAVDR 240

Query: 238 ILHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGEL 297
           ++ + P E++      L+ +L+ VIAQ+LL  + G GR  +FEVL  +  ++ +IR G+ 
Sbjct: 241 LVDVFPAEEKPYVRAQLAGSLQAVIAQKLL-SRPGGGRVAIFEVLTATAAVSSMIREGKT 299

Query: 298 HELKATMARSQEVGMQTFDQALYQLV 323
           H+L + +    + GMQTF+Q L Q +
Sbjct: 300 HQLASVLQTGGQSGMQTFEQGLQQRI 325