Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., pilus retraction protein PilT from Kangiella aquimarina DSM 16071

 Score =  270 bits (689), Expect = 6e-77
 Identities = 146/344 (42%), Positives = 223/344 (64%), Gaps = 3/344 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M++ + L   + + ASDL+I+ G P L RVDG++R      L   +V +L++ +M+D ++
Sbjct: 1   MDITELLAFSVKNNASDLHISAGMPPLIRVDGDIRRINVPPLEDKEVHSLIYDIMNDKQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            ++++  EA+F+  ++D  RFRV+AF Q     AV R I +R+ T EEL  P++ Q++++
Sbjct: 61  KDYEEFLEADFSFELKDLARFRVNAFVQNRGRAAVFRTIPSRVLTLEELNAPKIFQDISL 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGLVLV G TGSGKSTT+A M  Y N+++  HILT+EDPIEFVHE K+C+V QREV  
Sbjct: 121 EPRGLVLVTGPTGSGKSTTLAGMIDYVNENKHDHILTIEDPIEFVHESKKCLVNQREVHR 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT S+  AL+++LR+ PD+IL+GE+R  ET+  A+T AETGHL   TLH  +A + ++R+
Sbjct: 181 DTHSFSNALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P  ++      LS +L+ VIAQ LL+ KNG GR    E+L+ +P I +LIR  ++ 
Sbjct: 241 IDVFPAGEKAMVRSMLSESLQAVIAQTLLK-KNGGGRVAAHEILVGTPAIRNLIREDKVA 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSAND 342
           ++ + M     +GMQT D +L QLV    +S  DA   A +  +
Sbjct: 300 QMYSAMQTGLSLGMQTLDHSLKQLVSKGVVSRTDARMKAKNKEE 343