Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., pilus retraction protein PilT from Kangiella aquimarina DSM 16071

 Score =  423 bits (1088), Expect = e-123
 Identities = 207/371 (55%), Positives = 287/371 (77%), Gaps = 3/371 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEA-LSVADVTALLHAMMDDARQ 59
           M++N  L  ++ HK SDL+ITV  P   +++G++R   ++ L+ A V AL+H+ M + + 
Sbjct: 1   MDINPLLKALMEHKGSDLFITVHRPPCIKINGQIRPVTKSMLTPAQVEALIHSSMTEKQM 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            EF++ +E  +A+ V + GRFR SAF+QR  PG V+RRIET+IPT E+LK+P +L  LA+
Sbjct: 61  KEFEEKKECQYAISVENIGRFRASAFYQRNQPGLVVRRIETKIPTTEDLKIPNILNELAM 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
            KRG+++ VGATG+GKST++AAM GYRN++  GHI+++EDPIE+VH H +CI+TQREVG+
Sbjct: 121 KKRGIIIFVGATGTGKSTSLAAMIGYRNRNSAGHIISIEDPIEYVHRHDKCIITQREVGI 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DTES+E ALKN+LRQAPD+ILIGE+RS+ETM  A+TFAETGHLC+ TLHANNANQA++RI
Sbjct: 181 DTESFETALKNTLRQAPDVILIGEVRSKETMSNAITFAETGHLCLCTLHANNANQAIDRI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           LH  PKE+  + L+DLSLN + +IAQQL+  K+GKGR    E+L+N+P I+D IR+GE+H
Sbjct: 241 LHFFPKEEHSRVLMDLSLNTRAIIAQQLVPTKDGKGRRAAIEILINTPLISDHIRKGEVH 300

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRGD-DYGS 357
            LK  MARS+E+GMQTFDQAL+ L V+ +IS +DAL  ADSANDLRL +K    D D  +
Sbjct: 301 LLKELMARSRELGMQTFDQALFDLYVEGEISYEDALLYADSANDLRLKIKLHEKDADSLT 360

Query: 358 GSLQNVKIDME 368
            S   ++++M+
Sbjct: 361 ESTDGLEVEMD 371