Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., type II secretion system ATPase GspE from Erwinia tracheiphila SCR3

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 87/279 (31%), Positives = 138/279 (49%), Gaps = 24/279 (8%)

Query: 3   LNQYLDGMLTHKASDLYITVGAPIL---YRVDGELRAQGEA---LSVADVTALLHAMMDD 56
           +N  L   +  +ASD++I     ++   +R+DG L    E    L+   V+ +      D
Sbjct: 113 INAILSQAIKERASDVHIEPFGLLIAVRFRIDGVLHKMLEPERRLASMLVSRIKVMSKLD 172

Query: 57  ARQAEFKQTREANFAVVRDSGRFRVSAFFQRELPGAVIRRIETRIP--TFEELKLPEVL- 113
             +    Q    +  +   +   RVS          V+R ++  +   +   L + E L 
Sbjct: 173 IAEKRMPQDGRISLRLGHQAIDVRVSVIPCSHGERVVMRLLDKNVVPLSLSHLGMSEALC 232

Query: 114 ---QNLAIAKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCI 170
                LA    G+ LV G TGSGKSTT+ A+    N+    +I+T+EDP+E+        
Sbjct: 233 KRVMMLANRPNGIFLVTGPTGSGKSTTLYAVISALNRAER-NIMTIEDPVEY----DIAG 287

Query: 171 VTQREVGLDTE-SYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHAN 229
           ++Q +V    E ++   L+  LRQ PD+ILIGEIR RET + A+  + TGH+ +ATLH N
Sbjct: 288 ISQTQVNPKVEMTFAHGLRAILRQDPDVILIGEIRDRETAQIAVQASLTGHMVLATLHTN 347

Query: 230 NANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLR 268
            +  A+ R+  +      E FL  LS +L GV+AQ+L+R
Sbjct: 348 TSVGAITRLQDM----GVEPFL--LSGSLSGVLAQRLVR 380