Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., pilus retraction protein PilT from Enterobacter asburiae PDN3

 Score =  230 bits (586), Expect = 5e-65
 Identities = 127/320 (39%), Positives = 193/320 (60%), Gaps = 4/320 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEALSVADVTALLHAMMDDARQA 60
           M++ + +   + H  SDL++   +P  +R  G L  +       DV ALL A ++D +Q 
Sbjct: 1   MDVEEIVALSVKHNVSDLHLCSDSPPRWRRLGRL--EPAPFPPPDVGALLKAWLNDEQQG 58

Query: 61  EFKQTREANFAVVRDSG-RFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIA 119
            +    + +FA     G R R SAF Q       +R +    P    L  P  +  L   
Sbjct: 59  TWWAKGQVDFAATVTGGQRLRGSAFKQMSGISVTLRLLPRSCPQLSSLGAPRAIPELLCN 118

Query: 120 KRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLD 179
             GL+LV GATGSGKSTT+AAM  + N H  GHILT+EDP+EF+++ +RC++ QRE+G  
Sbjct: 119 DAGLILVTGATGSGKSTTLAAMVDFLNHHADGHILTLEDPVEFIYQSERCLIQQREIGQH 178

Query: 180 TESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERIL 239
           + S+  AL+++LRQ PD+IL+GE+R  ET+  A+T AETGHL +ATLH   A+QA+ER++
Sbjct: 179 SPSFAEALRSALRQDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGASQAIERLV 238

Query: 240 HLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHE 299
              P ++++     L+ +L+ V+AQ+LL D  G GR  ++E+L+N+   A+LIR G+  +
Sbjct: 239 DTFPAQEKDPVRNQLAGSLRAVLAQKLLPDLQG-GRVALYELLVNTAAAANLIREGKTWQ 297

Query: 300 LKATMARSQEVGMQTFDQAL 319
           L   +   Q+ GMQ FDQ+L
Sbjct: 298 LPGIIQTGQQAGMQNFDQSL 317