Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative protein YggR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  239 bits (611), Expect = 6e-68
 Identities = 128/329 (38%), Positives = 204/329 (62%), Gaps = 4/329 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEALSVADVTALLHAMMDDARQA 60
           M + + +   + H  SDL++    P  +R+ G + A        DV  LL   +DD ++A
Sbjct: 1   MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAA--PFDAPDVEELLREWLDDDQRA 58

Query: 61  EFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIA 119
              +  + +FAV + ++ R R SAF QR+     +R + +  P  E+L  P VL  L  +
Sbjct: 59  ILLENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKS 118

Query: 120 KRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLD 179
           + G++LV GATGSGKSTT+AAM GY NQH   HILT+EDP+E+++  +RC++ QRE+GL 
Sbjct: 119 ENGMILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178

Query: 180 TESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERIL 239
             ++   L+ +LR+ PD+IL+GE+R  ET+  A+T AETGHL +ATLH   A QA+ER++
Sbjct: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238

Query: 240 HLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHE 299
              P ++++     L+ +L+ V++Q+L  DK  +GR  +FE+L+N+P + +LIR G+ H+
Sbjct: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQ 297

Query: 300 LKATMARSQEVGMQTFDQALYQLVVDDKI 328
           L   +   Q+VGM TF Q+    V + ++
Sbjct: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326