Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., type II secretion system protein GspE from Dickeya dianthicola ME23

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 113/371 (30%), Positives = 175/371 (47%), Gaps = 30/371 (8%)

Query: 3   LNQYLDGMLTHKASDLY---ITVGAPILYRVDGELRAQGEAL-SVADVTALLHAMMDDAR 58
           +NQ L   +  +ASD++   +  G  +  R+DG L     A  S+A        +M    
Sbjct: 98  INQTLKLAIQRRASDIHFEPLPAGYRVRLRIDGVLHETPSAPDSLAGRLIARLKIMGKLN 157

Query: 59  QAEFKQTREANFAVVRDSGRF--RVSAFFQRELPGAVIRRIETRIPTFE--ELKLP-EVL 113
            AE +  ++  F++  D   +  R++    +     V+R ++T+    E   L LP   L
Sbjct: 158 IAERRLPQDGQFSLRLDQHAYSLRIATLPVQGGEKVVLRVLQTQQQALELDALGLPARAL 217

Query: 114 QNLAIA---KRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCI 170
           Q    A    +GL+LV G TGSGK+ T+ +   + N   + +I +VEDPIE         
Sbjct: 218 QQFKQALSLPQGLILVTGPTGSGKTFTLYSAIRWLNDV-SRNICSVEDPIEIPLAGINQT 276

Query: 171 VTQREVGLDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANN 230
                  LD   +   L+  LRQ PD+I+IGEIR  ET E A+  A+TGHL ++TLH N+
Sbjct: 277 AIHAPSQLD---FARVLRALLRQDPDVIMIGEIRDAETAEIAVKAAQTGHLVLSTLHTNS 333

Query: 231 ANQALERILHL-VPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIA 289
           A   L R+ HL +P      +LL  +L L  VIAQ+L+R      R    ++  ++  + 
Sbjct: 334 AADTLVRLGHLGIP-----GYLLAAALKL--VIAQRLVRRLCPHCR----QLTEDAVTLP 382

Query: 290 DLIRRGELHELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKT 349
           D + +G L + +AT       G      ALY+L+      +Q AL  + S +D    L  
Sbjct: 383 DNLWQGPLRQWRATGCEHCFSGYYG-RAALYELLPVTPALQQ-ALSGSASWSDNSQPLPL 440

Query: 350 KRGDDYGSGSL 360
           +RG    S  L
Sbjct: 441 QRGTGLLSAGL 451