Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., type IV pilus twitching motility protein PilT from Dickeya dianthicola ME23

 Score =  234 bits (597), Expect = 3e-66
 Identities = 128/324 (39%), Positives = 200/324 (61%), Gaps = 4/324 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEA--LSVADVTALLHAMMDDAR 58
           M++++++   +    SDL++  G P ++R+DG+L A      L  A++     + +D A 
Sbjct: 1   MDVSEWVRSSVKQNVSDLHLCSGHPPVWRIDGQLVADAAQPPLHNAELEQWCRSWLDPAC 60

Query: 59  QAEFKQTREANFAVVRDSG-RFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLA 117
           + + +Q+ + + A+    G R R + F QR    A +R I    P    L  P V+  LA
Sbjct: 61  EQQLRQSGQTDCALTLPEGQRLRANLFMQRHGLSAALRLIPQHQPDLPTLGAPPVVAELA 120

Query: 118 IAKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVG 177
               GL+LV GATGSGKSTT+AAM    NQ R  HI+T+EDPIEF+H  +R ++ QRE+G
Sbjct: 121 DCADGLILVTGATGSGKSTTLAAMITALNQRRARHIITLEDPIEFLHTSQRSLIQQREIG 180

Query: 178 LDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALER 237
             +E +  AL+ +LR+ PD++L+GE+R  ET+  A+T AETGHL +ATLH   A QA++R
Sbjct: 181 RHSEGFASALRAALREDPDVLLLGELRDGETIRLALTAAETGHLVLATLHTRRAVQAVDR 240

Query: 238 ILHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGEL 297
           ++ + P E++      L+ +L+ V+AQ+LL    G GR  +FEVLL +P +++LIR G+ 
Sbjct: 241 LVDVFPAEEKAFVRAQLAASLQAVVAQKLLPGAQG-GRVALFEVLLATPAVSNLIREGKT 299

Query: 298 HELKATMARSQEVGMQTFDQALYQ 321
           H+L + +    +VGMQTF+Q+  Q
Sbjct: 300 HQLPSLLQTGSQVGMQTFEQSYQQ 323