Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola ME23

 Score =  101 bits (252), Expect = 4e-26
 Identities = 99/291 (34%), Positives = 149/291 (51%), Gaps = 48/291 (16%)

Query: 3   LNQYLDGMLTHKASDLYITVGAP---ILYRVDGELRA----QGEALSVADVTALLHAMMD 55
           +N  L   + HKASD++I        I +R+DG LR     Q +  S+      + A +D
Sbjct: 124 INAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLREILRPQRQLASLLVSRIKVMAKLD 183

Query: 56  DARQAEFKQTREANFAVVRDSGR---FRVSAFFQRELPGAVIRRIETRIPTFEELKLPEV 112
            A +   +  R A    +R  GR    RVS      LP     R+  R+     ++L   
Sbjct: 184 IAEKRVPQDGRMA----LRIGGRAIDVRVST-----LPSNYGERVVLRLLDKNSVRLD-- 232

Query: 113 LQNLAIAKR-------------GLVLVVGATGSGKSTTM-AAMTGYRNQHRTGHILTVED 158
           L+ L +A+              G++LV G TGSGKSTT+ AA++   +  R  +I+TVED
Sbjct: 233 LETLGMAEHHRRQVDTLIHRPHGIILVTGPTGSGKSTTLYAALSRLNSAER--NIMTVED 290

Query: 159 PIEFVHEHKRCIVTQREVGLDTE-SYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAE 217
           PIE+  E     + Q +V    + ++   L+  LRQ PD++L+GEIR  ET + A+  + 
Sbjct: 291 PIEYELEG----IGQTQVNPKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASL 346

Query: 218 TGHLCMATLHANNANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLR 268
           TGHL ++TLH N+A  AL R+  +      E FL  LS +L GV+AQ+L+R
Sbjct: 347 TGHLVLSTLHTNSALGALSRLQDM----GIEPFL--LSTSLLGVLAQRLVR 391