Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola 67-19

 Score =  101 bits (252), Expect = 4e-26
 Identities = 98/284 (34%), Positives = 145/284 (51%), Gaps = 34/284 (11%)

Query: 3   LNQYLDGMLTHKASDLYITVGAP---ILYRVDGELRA----QGEALSVADVTALLHAMMD 55
           +N  L   + HKASD++I        I +R+DG LR     Q +  S+      + A +D
Sbjct: 124 INAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLREILRPQRQLASLLVSRIKVMAKLD 183

Query: 56  DARQAEFKQTREANFAVVRDSGR---FRVSAFFQRELPGAVIRRIETRIPTF--EELKLP 110
            A +   +  R A    +R  GR    RVS          V+R ++        E L + 
Sbjct: 184 IAEKRVPQDGRMA----LRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMA 239

Query: 111 E----VLQNLAIAKRGLVLVVGATGSGKSTTM-AAMTGYRNQHRTGHILTVEDPIEFVHE 165
           E     L  L     G++LV G TGSGKSTT+ AA++   +  R  +I+TVEDPIE+  E
Sbjct: 240 EHHRRQLDTLINRPHGIILVTGPTGSGKSTTLYAALSRLNSAER--NIMTVEDPIEYELE 297

Query: 166 HKRCIVTQREVGLDTE-SYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMA 224
                + Q +V    + ++   L+  LRQ PD++L+GEIR  ET + A+  + TGHL ++
Sbjct: 298 G----IGQTQVNPKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLS 353

Query: 225 TLHANNANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLR 268
           TLH N+A  AL R+  +      E FL  LS +L GV+AQ+L+R
Sbjct: 354 TLHTNSALGALSRLQDM----GIEPFL--LSTSLLGVLAQRLVR 391