Pairwise Alignments

Query, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Twitching motility protein PilT from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  298 bits (763), Expect = 1e-85
 Identities = 160/327 (48%), Positives = 213/327 (65%), Gaps = 3/327 (0%)

Query: 1   MDIAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQR 60
           M++ E++  SVKHN SDLHL    P   R  G +       FT  DV RL+ + +NDAQ+
Sbjct: 1   MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMENA---PFTAPDVDRLLLDWLNDAQQ 57

Query: 61  SEYEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIAN 120
            ++    ++DF+  L    R R +AF   +G S   R +P   P L ++  P I   +  
Sbjct: 58  YQWRTHGQLDFAVSLSGTRRLRASAFTHQQGTSLALRLLPERCPDLAKIQTPPIVPALLA 117

Query: 121 YEKGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHR 180
            E GL+LVTG TG GKSTTLAAMV Y+N H +KHILT+EDPIE+ +++ +CLI QRE+ +
Sbjct: 118 SENGLILVTGATGCGKSTTLAAMVGYLNQHADKHILTLEDPIEYRYTSKRCLIQQREIGQ 177

Query: 181 DTHSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRI 240
              +F   LR+ALREDPDVIL+GELRD ETI LALTAAETGHLV  TLHT  AA+ ++R+
Sbjct: 178 HCATFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237

Query: 241 IDVFPGSDKDMVRSMLSESLRAVIAQKLLKRVGGGRVACHEIMLATPAIRNLIREDKVAQ 300
           +D FP  +K+ VRS L+ SLRAV++QKL      GRVA  E+++ TPA  NLIRE K+ Q
Sbjct: 238 VDSFPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQ 297

Query: 301 MYSIIQTGAAHGMQTMEQNAKQLIARG 327
           +  +IQTG   GM T  Q+A+   A+G
Sbjct: 298 LAHVIQTGQQQGMMTFAQSAQWRQAQG 324