Pairwise Alignments

Query, 185 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., putative factor involved in shape determination from Pseudomonas putida KT2440

 Score =  128 bits (321), Expect = 7e-35
 Identities = 66/176 (37%), Positives = 114/176 (64%), Gaps = 12/176 (6%)

Query: 1   MNSLS----FLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIP 56
           MN+LS    F++ TL  LY+++V+LR  LQ  +A+FYNP  QF V+ATQP++ P+RR+IP
Sbjct: 1   MNALSGAAIFVVQTLVSLYLVIVLLRFVLQLVKANFYNPLCQFAVRATQPLLKPIRRIIP 60

Query: 57  SIGSIDLATIVFAYVL--CVLKFMALVLIASSGSVSFSADFLFLGLLSLIKAAGGLLFWV 114
           S+G +D ++++ A V+   ++ F+ +V   + G V     +  +G+ SL       +FWV
Sbjct: 61  SVGGLDTSSLLLAVVIQALLMGFVLMVTYGTFGDVLHLLMWAIIGITSLFLK----IFWV 116

Query: 115 -LLIRAILSWVS-QGRSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVLVLFIVLQ 168
            +++  I+SWV+    +P   + +Q++EP+LAP RR++P +GG D+S +  F+ +Q
Sbjct: 117 AMIVMVIVSWVAPNSHNPAAELAYQISEPVLAPFRRLVPNLGGMDISPIFAFLAIQ 172



 Score = 39.7 bits (91), Expect = 3e-08
 Identities = 21/85 (24%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 4   LSFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDL 63
           ++ L   +F + ++V+++  W+     + +NP ++   + ++PV+ P RR++P++G +D+
Sbjct: 106 ITSLFLKIFWVAMIVMVIVSWVAP---NSHNPAAELAYQISEPVLAPFRRLVPNLGGMDI 162

Query: 64  ATI-VFAYVLCVLKFMALVLIASSG 87
           + I  F  +  V  F+   L A +G
Sbjct: 163 SPIFAFLAIQVVQSFVMPPLAAYAG 187