Pairwise Alignments

Query, 185 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  101 bits (252), Expect = 7e-27
 Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 5/168 (2%)

Query: 2   NSLSFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSI 61
           N  +FL+N +F +   +++LR  +Q  R  F NP  Q  +  T  +V P R++IP    +
Sbjct: 4   NMTTFLLNAVFGILTFLLVLRFLMQWTRTSFQNPLGQMAMALTDFMVKPARKLIPPARQL 63

Query: 62  DLATIVFAYVLCVLKFMALVLIASSGSVSFSADFLF-LGLLSLIKAAGGLLFWVLLIRAI 120
           DL+T++ A+++ V+ F  L L+A++     S  F F    ++++     + F+ +L+ AI
Sbjct: 64  DLSTLLLAWLVQVILFALLTLLAAA---PVSPVFWFWQAFVAVLGQMLDVFFYAILLMAI 120

Query: 121 LSWVSQGRSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVLVLFIVLQ 168
           LSW++   SPI  V +QL+ P+L P+R ++P + GFD S LV  ++LQ
Sbjct: 121 LSWINP-YSPIYGVLNQLSAPILNPLRNVLPSIQGFDFSALVALLLLQ 167



 Score = 40.0 bits (92), Expect = 2e-08
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 103 LIKAAGGLLFWVLLIRAILSWVSQG-RSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVL 161
           L+ A  G+L ++L++R ++ W     ++P+  +   LT+ M+ P R++IP     DLS L
Sbjct: 9   LLNAVFGILTFLLVLRFLMQWTRTSFQNPLGQMAMALTDFMVKPARKLIPPARQLDLSTL 68

Query: 162 VLFIVLQFANFLM 174
           +L  ++Q   F +
Sbjct: 69  LLAWLVQVILFAL 81



 Score = 33.1 bits (74), Expect = 3e-06
 Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 7   LINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLATI 66
           ++  + D++   ++L   L       Y+P    + + + P++ PLR V+PSI   D + +
Sbjct: 103 VLGQMLDVFFYAILLMAILSWINP--YSPIYGVLNQLSAPILNPLRNVLPSIQGFDFSAL 160

Query: 67  VFAYVLCVLKFMAL 80
           V   +L ++  + L
Sbjct: 161 VALLLLQMISRIVL 174