Pairwise Alignments

Query, 185 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  196 bits (497), Expect = 3e-55
 Identities = 94/178 (52%), Positives = 131/178 (73%), Gaps = 5/178 (2%)

Query: 1   MNSLSFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGS 60
           MN+L+FL++T+ +LY MV++LRIW+Q A  DFYNPFSQF+VK TQP++GPLRRVIP++G 
Sbjct: 1   MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGP 60

Query: 61  IDLATIVFAYVLCVLKFMALVLIASSGSVSFSADFLFLGLLSLIKAAGGLLFWVLLIRAI 120
           ID A+++ AY+L  +K + L  +     V+F       GLL L+K  G L+FWVLL+ AI
Sbjct: 61  IDSASLLVAYILSFIKAIVLFKV-----VTFLPIIWIAGLLILLKTIGLLIFWVLLVMAI 115

Query: 121 LSWVSQGRSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVLVLFIVLQFANFLMGDVI 178
           +SWVSQGRSPIEYV  QL +P+L PIRR++P MGG D S ++L ++L   N  + +V+
Sbjct: 116 MSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVL 173