Pairwise Alignments

Query, 391 a.a., YggW family oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  534 bits (1375), Expect = e-156
 Identities = 261/384 (67%), Positives = 302/384 (78%), Gaps = 10/384 (2%)

Query: 5   PSLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLH 64
           P LSLYIHIPWCVQKCPYCDFNSHA KGE+P  +Y+  LL DLD D+   Q     R + 
Sbjct: 5   PPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQ----GREVK 60

Query: 65  SIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTR 124
           +IFIGGGTPSL+S   +  LL GV  R+    + EITMEANPGT+EA RF  Y+ AGV R
Sbjct: 61  TIFIGGGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNR 120

Query: 125 ISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADL 184
           ISIGVQSF   KL RLGRIHG QEA RAA+LA+ +GL SFNLDLMHGLPDQT E+AL DL
Sbjct: 121 ISIGVQSFSEPKLKRLGRIHGPQEAKRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDL 180

Query: 185 DQAIALNPPHLSWYQLTIEPNTLFYSKPPKLPDEDALWDIFELGHQKLSDAGYVQYEISG 244
            QAIALNPPHLSWYQLTIEPNTLF S+PP LPD+DALWDIFE GHQ L+ AGY QYE S 
Sbjct: 181 RQAIALNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSA 240

Query: 245 YSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKA 304
           Y+KPGYQCQHNLNYWRFGDYLGIGCGAHGK++F DGRI+RTTKT+HPRGY+         
Sbjct: 241 YAKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQG------R 294

Query: 305 YLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEGYLSED 364
           YL+S++ V+D DKPFEFFMNRFRL+E  P+A+F   TGLT  VIR  +D A+++GYL+E 
Sbjct: 295 YLESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTEC 354

Query: 365 DQHWQITEKGKLFLNDLLEAFMAD 388
           +Q+WQIT  GKLFLN LLE F+A+
Sbjct: 355 EQYWQITRHGKLFLNSLLELFLAE 378