Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., A/G-specific adenine glycosylase (EC 3.2.2.-) from Variovorax sp. SCN45

 Score =  283 bits (723), Expect = 6e-81
 Identities = 146/346 (42%), Positives = 200/346 (57%), Gaps = 14/346 (4%)

Query: 4   FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
           FA  I+ W  ++GR  LPWQ  ++ YRVWLSE+MLQQTQV+TV+ YF RFLERFP V AL
Sbjct: 7   FAAQIVAWQRSHGRSQLPWQNTRDPYRVWLSEVMLQQTQVSTVLGYFARFLERFPDVKAL 66

Query: 64  AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
           AA  +DEV   W+GLGYY+RARN+H+ AQ VV+ +GGEFP   E++  LPG+GRSTAAA+
Sbjct: 67  AAGTEDEVFGLWSGLGYYSRARNMHRCAQDVVARFGGEFPRTAEELVTLPGIGRSTAAAI 126

Query: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVD----VDKYN 179
            +  + +  AILDGNVKR L R     G     + E  LW  A    P  +    +  Y 
Sbjct: 127 AAFCFGERVAILDGNVKRVLTRVLGFGGDMSSSAQERALWDLATQLLPPAEQREAIAHYT 186

Query: 180 QAMMDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYH- 238
           Q +MD+GA +C   KP C +CPV+  C+  ++G P+ YP K  K  +  ++ W ++    
Sbjct: 187 QGLMDLGATVCLPRKPSCMICPVDKTCVGLREGAPERYPVKTRKLKRSAQSLWLLLARDA 246

Query: 239 DNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYH 298
              VWLE+RP  GIW GL+C P  +  +        A+  +   S K L AF H  +H  
Sbjct: 247 QGRVWLEKRPAKGIWAGLHCLPVFDSRDDLLA----ALPSAAQGSVKDLPAFVHVLTHKD 302

Query: 299 LDITPILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLLHT 344
           L + P+LL+  +       G    W        +GL APV++LL +
Sbjct: 303 LHMHPLLLEGGQP-----SGEGARWVEAQEWSRLGLPAPVRKLLES 343