Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., A/G-specific adenine glycosylase from Magnetospirillum magneticum AMB-1

 Score =  220 bits (561), Expect = 4e-62
 Identities = 130/345 (37%), Positives = 187/345 (54%), Gaps = 17/345 (4%)

Query: 5   AQAILTWYDAYGRKNLPWQ----QNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTV 60
           A  +L WYD   R+ LPW+    +  + Y VWLSE+MLQQT VA VIPYF+ F+ R+P V
Sbjct: 45  ASLLLAWYDR-DRRVLPWRYAPGEAADPYHVWLSEVMLQQTTVAAVIPYFQAFIRRWPRV 103

Query: 61  HALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTA 120
             LAAA  +EV+  W GLGYYARARNLH  A++V    GG FP D   +  LPG+G  TA
Sbjct: 104 GDLAAAATEEVMAAWAGLGYYARARNLHACAKLVAEWRGGRFPEDEAGLRQLPGIGDYTA 163

Query: 121 AAVLSSVYKKPHAILDGNVKRTLARCFAV-EGWPGQKSVENQLWHYAEMHTPKVDVDKYN 179
           AA+ +  +     ++DGNV+R +AR FAV +  P  K    +L   A   TP      Y 
Sbjct: 164 AAIAAIAFGHRAVVVDGNVERVMARMFAVTDPLPAAKP---RLKELAATLTPDDRAGDYA 220

Query: 180 QAMMDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPV-KATWFVMLYH 238
           QA+MD+GA ICT   P C LCP    C A+  G  +  P K  K ++P  +   F +   
Sbjct: 221 QAVMDLGATICTPRSPACGLCPWRPGCRAQALGLAESLPAKVEKAERPTRRGVVFWLTAP 280

Query: 239 DNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLI--AFRHTFSH 296
           D +V L +RP  G+ GG+  FP ++  +   ++D+ A           L+     HTF+H
Sbjct: 281 DGSVLLRRRPPKGLLGGMMEFPSTDWRDAAWSLDEAAPSAPLAPKSWRLLPGLVTHTFTH 340

Query: 297 YHLDITPILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQL 341
           +HL++T    +   +P +     +G+W  L   +E  L   ++++
Sbjct: 341 FHLELTVAAGRTPAQPAV-----RGVWCPLDRLEEQALPTLMRKV 380