Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., A/G-specific adenine glycosylase from Erwinia tracheiphila SCR3

 Score =  405 bits (1042), Expect = e-118
 Identities = 193/343 (56%), Positives = 245/343 (71%), Gaps = 5/343 (1%)

Query: 4   FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
           FA  +L WY  +GRKNLPWQQ K  Y+VWLSE+MLQQTQVATV PYFERF+ RFP++  L
Sbjct: 7   FASQVLDWYQRFGRKNLPWQQEKTPYKVWLSEVMLQQTQVATVKPYFERFMSRFPSITDL 66

Query: 64  AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
           AAAP DEVL+ WTGLGYYARARNLHKAA  V  ++GG FP   +++  LPGVGRSTA A+
Sbjct: 67  AAAPLDEVLYLWTGLGYYARARNLHKAAVRVAEKHGGTFPQTYDEVADLPGVGRSTAGAI 126

Query: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMM 183
           LS    +   ILDGNVKR LARC+ + GWPG+K VE +LW  +E  TP   V ++NQAMM
Sbjct: 127 LSLSLGQHFPILDGNVKRVLARCYTIGGWPGRKEVEKRLWQISEQVTPADRVSQFNQAMM 186

Query: 184 DMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVW 243
           D+GAM+CTR++PKC +CP+ S C+A   G+  +YPGKKPK   P +  W +ML H N+VW
Sbjct: 187 DLGAMVCTRTRPKCDICPLSSVCIAYANGSWADYPGKKPKQTLPERTGWMLMLRHGNSVW 246

Query: 244 LEQRPQSGIWGGLYCFPQ-SEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDIT 302
           LEQRP  G+WGGL+CFPQ +    +   +++R I    +      I+FRHTFSH+HLDI 
Sbjct: 247 LEQRPPVGLWGGLFCFPQFASQPEVVAWLNERRIDSGRLQQG---ISFRHTFSHFHLDIV 303

Query: 303 PILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLLHTL 345
           P+ L L+     + EG+ GLWYNL+ P  +GLAAPV++LL  L
Sbjct: 304 PVQLCLTVTGAAMDEGA-GLWYNLAQPPAVGLAAPVERLLKQL 345