Pairwise Alignments

Query, 375 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., membrane-bound lytic murein transglycosylase C (VIMSS) from Escherichia coli BW25113

 Score =  330 bits (845), Expect = 5e-95
 Identities = 168/326 (51%), Positives = 224/326 (68%), Gaps = 2/326 (0%)

Query: 48  KDTAALDALINSFSGNIEKRWGRRELKIAGKNNYVKYIDNYLSRSEVNFTEGRIIVETVS 107
           KDT   D L+  F+ NIE  WG +E+ IAG  +YVKY D Y +RS +NF +G I +ET++
Sbjct: 32  KDTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIA 91

Query: 108 PIDPKAHLRNAIITTLLTPDDPAHVDLFSS-KDIELKGQPFLYQQVLDQDGQPIQWSWRA 166
             +P AHLR AII TLL  DDP+ VDL+S   DI +  +PFLY QV+D  GQPI+W  RA
Sbjct: 92  GTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRA 151

Query: 167 NRYADYLIANHLKVKQVDFKKAYYVEIPMVKDQIDIRGYKYASIVRKASRKYDIPEDLIY 226
           + +ADYL+ N LK +    +  Y V I MV + +D R +KY  +VR+ASRKY + E LI 
Sbjct: 152 SNFADYLLKNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLIL 211

Query: 227 AIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKNRSGEPSPEYLFNPENNIDTG 286
           AI++TESSFNPYAVS ++A GLMQVV  TAG+DVF+  + +SG PS  +LF+P +NIDTG
Sbjct: 212 AIMQTESSFNPYAVSRSDALGLMQVVQHTAGKDVFR-SQGKSGTPSRSFLFDPASNIDTG 270

Query: 287 TAYFYILKNRYLKEVRHPTSLEYSMISAYNGGTGGVLSTFSSDRQRAMRDLNALQPNQVY 346
           TAY  +L N YL  + +PTS  Y++I+AYNGG G VL  FS+D+ +A   +N + P  VY
Sbjct: 271 TAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVY 330

Query: 347 WALTKKHPNAEARRYLEKVTKFKKEF 372
             LT +HP+AE+RRYL KV   +K +
Sbjct: 331 QTLTTRHPSAESRRYLYKVNTAQKSY 356